I had to reinstall windows 8.1 and forgot how to setup this, so referred to my above message which I have noticed is slightly incorrect. But I have improved it anyway so here goes (not for the feint of heart).
Go to http://bitpatch.com/ddwrapper.html and download DDwrapper, extract into the TS directory with Game.exe in it. Open aqrit.cfg in wordpad, set NoVideoMemory = 1 only. Then right click on game.exe and set the compatibility tab to "reduce color mode 16-bit" and "Disable high dpi"
Now I have a largish monitor (1920x1080) and was sick of squinting so I wanted to run it at a lower res, say 1280x720, but I wanted to do it from a batch file. I found out about a program to do this while try to get Z to run. This is QRes, get it from http://sourceforge.net/projects/qres/ and extract to the same directory.
(The next few programs are optional, but will enhance the experience.) Next I was annoyed by the flickering caused by the taskbar, so I downloaded TaskBarHider from http://www.itsamples.com/taskbar-hider.html and again extracted it to the same directory. And I wanted to minimise all running programs so I used NirCmd from http://www.nirsoft.net/utils/nircmd.zip and extract in the same place. These last two will need to be run once just to get rid of the message (you can close them immediately).
Ok, so you now have all the required programs. Create a batch file called game.bat in the same directory as all the other program .exes and type the following:
#Set the gaming resolution
qres /x:1280 /y:720
#The next four commands minimise all the open programs
nircmd sendkey lwin down #The next four commands minimise all the open programs
nircmd sendkey d down
nircmd sendkey lwin up
nircmd sendkey d up
#hide the taskbar
start TaskBarHider.exe
#Stops things going too quickly
choice /t 1 /d y
start TaskBarHider.exe --hide
#run the game
Game.exe -win
#Now clean up and return to desktop resolution
TaskBarHider.exe --show --exit
nircmd closeprocess TaskBarHider.exe
qres /x:1920 /y:1080
The desktop resolution can be changed to whatever you run. Finally, I have noticed people struggling to get custom resolutions out of TS. If that includes you, now edit SUN.ini and replace the [Video] section with this:
[Video]
AllowHiResModes=yes
VideoBackBuffer=No
ScreenWidth=1272
ScreenHeight=680
StretchMovies=no
That's it. When you double click the .bat file, TS should load at a suitable resolution and without glitches. Long process, but worth it for such a great game. Best of luck.
Richard